CDS

Accession Number TCMCG006C41613
gbkey CDS
Protein Id XP_013742643.1
Location join(20364368..20364464,20364568..20364698,20364862..20365062,20365167..20365235,20365364..20365435,20365750..20365783,20365905..20365959,20366221..20366280,20366370..20366441,20366660..20366723,20366823..20366905,20367030..20367097,20367210..20367264,20367408..20367465,20367547..20367615,20367801..20367869,20368160..20368249,20368536..20368622,20368726..20368841,20368926..20368992,20369076..20370116,20370196..20370258,20370350..20370473,20370547..20370647,20370742..20370804,20370912..20370984,20371076..20371122)
Gene LOC106445608
GeneID 106445608
Organism Brassica napus

Protein

Length 1042aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013887189.2
Definition pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12813        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGCAATGATTTGAAGACATGGGTTTCGGATAAGCTGATGGGGCTGCTTGGCTATTCTCAAATAACTCTTGTTAACTATGTCATTGTAAAGGCTAAGCAATCAAAGTCACCAGCTGAACTTGTTGGAGTGTTGATGGATAACGGATTTGCTTCTTCTGGTGATACTCGTTCCTTTGCGGAAGAGATTTTTGCTAGAGTTCCTCATCAAACTGCTGCGGTGAATCTTTACCAACAACGGGAAGCAGAGGCAGCAATGCTAGTGAGGAAGCAACAAACATATGCTCTTATAGATGATGATGATGATGATGATGAAGACGAAGTGGTTAAGGAGAAAAAACCTTCAGCTTCTGAATCCAAGAAGTCATCTAAGGGCAAGAAAAGGTTTAGAAAGAAAAGTGGGCCGTCAGATGACAGTGATGAAGAGGTGCCTGTTAGAGAGGACAGTAGACACGTTCGAAGAAAGGTTTCTGAAGATGAGGATGATGGTTCTGAGAAGAGGAAAGAGAAGGAGAAAGAAGAACTCGAGCAGCATATAAGAGATCGTGATACTGCACGGACACGAAAGCTAACGGAGCAAAAGTTGTCAAAGAAAGAGCAAGAGGAGGCTCTTCGAAGAGCGAACGCTTTGGAGGAGGATGATTTAAACTCTTTAAGGAAAGTTTCAAGACAAGAATATTTGAGGAAGAGGGAACAGAAGAAACTGGAAGAACTAAGGGATGAGATAGAAGATGAACAATATCTTTTCGCAGATGAAAAGCTCACAGAAACAGAGCTTCGTGAGTTTAGATACAAGAAAGAGCTTTATGATCTGGTGAAGAAAAGAACACAAGATGAAGATAACGTAGAGGAGTATAGAATTCCAGATGCTTATGATGATCAAGAGGGGGGTGTTGATCAGGAGAAGAGATTTGCTGTTGCTGTGCAACGATACAAGGATCTGGATTCAAGGGAGAAGATGGATCCATTTGCAGAGCAAGAAGCTTGGGAGGACCATCAGATTGGAAAAGCAAGACTAAAATTTGGCTCAAAGAACAAAAAAGCCTCAGACGATTATCAGTTTGTGTTCGAGGACCAAATAAATTTTATAAAGGAATCTGTGATGGCTGGTGAAAATTATGAAGATGATATGCATCCTAAAGAAGCTCAAGATGCGGCTGAAAAAACAGCTTTAGAAGAACTTCAGGAGGTCAGAAAAAGTCTGCCAATTTACGGGTATCGTGAGCAGTTGCTTCAGGCCGTGGAAGAGCATCAGGTTCTTGTCATTGTGGGAGACACTGGTTCAGGAAAGACAACACAAATACCACAATATCTCCATGAAGCTGGTTACACAAAGCGCGGAAAGGTTGGTTGTACACAGCCCCGAAGAGTTGCAGCTATGAGTGTTGCTGCCCGTGTTGCTCAAGAGATGGGTGTCAAACTTGGACATGAGGTTGGCTATTCCATTCGATTTGAGGATTGTACTTCAGATAAAACTGTTCTGAAGTATATGACTGATGGAATGCTTTTGCGTGAGCTGCTTGGGGAACCAGATCTGGCCAGCTACAGTGTCGTTATTGTAGACGAGGCGCACGAAAGAACCTTGTCAACCGATATACTGTTTGGATTAGTTAAGGATATAGCGCGGTTTCGACCAGATTTGAAGTTGTTGATATCTAGTGCAACAATGGATGCAGAAAAGTTTTCTGATTATTTCGATACAGCGCCGATTTTTAGTTTTCCAGGGAGAAGGTATCCAGTTGAAATTAACTTTACAAGTGCACCTGAAGCTGATTACATGGACGCAGCAATAGTTACTGTGCTTACTATCCATGTGAGGGAGCCGCTTGGAGATATATTGGTCTTCTTAACTGGTCAAGAGGAAATTGAAACCGCAGAAGAAATCTTGAAGCAAAGGATAAGAGGTTTGGGTACAAAGATCCGTGAATTAATCATATGCCCGATTTACGCAAACCTTCCAAGCGAACTCCAAGCGAAGATATTTGAGCCAACTCCAGAAGGTGCACGGAAAGTAGTCCTAGCGACAAACATTGCTGAAACATCATTGACGATTGATGGTATAAAGTATGTTGTTGATCCTGGATTTAGCAAGATGAAATCATATAACCCGAGAACAGGGATGGAGTCTTTGCTGATTACTCCTATCTCCAAGGCTTCAGCAACTCAACGTGCTGGTCGAGCTGGAAGAACAAGCGCAGGGAAGTGTTACCGTCTGTACACAGCGTTTAATTACAACAACGACTTGGAGGAAAACACGGTGCCAGAAGTACAGAGGACGAATCTTGCAAGTGTGGTACTTGCTTTAAAGAGTCTTGGAATTCATGATCTCATAAACTTTGATTTTATGGACCCTCCACCTGCTGAAGCACTTGTGAAGGCTTTAGAGCTTCTCTTCGCTCTAGGTGCTCTAAATAAGCTCGGTGAATTGACTAAAGCTGGTAGAAGGATGGCAGAGTTTCCCCTTGATCCGATGTTATCGAAGATGATTGTTGTTTCTGACAAGTACAAGTGCTCAGATGAGATAATATCAATTGCTGCTATGTTGTCAGTTGGAGGGTCTATCTTCTACCGTCCCAAGGACAAACAGGTTCACGCTGACAATGCAAGAATGAATTTTCACACTGGAAATGTCGGTGACCATATTGCTTTGCTAAAGGTTTACAGCTCATGGAAGGAAACAAACTACTCCACACAGTGGTGCTATGAGAACTACATTCAGGTACGGAGCATGAAAAGAGCCAGAGATATCCGTGACCAGTTGGAAGGACTTCTCGAGAGAGTGGAGATAGAAATCAGCTCAAACATGAACGAATTGGATTCAGTTAGAAAGTCCATTGTAGCTGGTTTCTTCCCGCACACTGCGAAGCTGCAGAAGAATGGATCATATCGAACTGTGAAGCATCCCCAGACAGTGCACATACATCCCAATTCAGGCTTATCTCAGGTGTTGCCAAGATGGGTTGTATATCATGAACTAGTGCTCACCTCCAAGGAATATATGCGACAGGTAACGGAGTTGAAACCAGAGTGGTTGATTGAGTTAGCTCCTCACTACTACCAGCGCAAGGACGTTGAAGATGATGCATCAAAGAAAATGCCCAAAGGAGCTGGTAAAGCTGCGATCTAA
Protein:  
MASNDLKTWVSDKLMGLLGYSQITLVNYVIVKAKQSKSPAELVGVLMDNGFASSGDTRSFAEEIFARVPHQTAAVNLYQQREAEAAMLVRKQQTYALIDDDDDDDEDEVVKEKKPSASESKKSSKGKKRFRKKSGPSDDSDEEVPVREDSRHVRRKVSEDEDDGSEKRKEKEKEELEQHIRDRDTARTRKLTEQKLSKKEQEEALRRANALEEDDLNSLRKVSRQEYLRKREQKKLEELRDEIEDEQYLFADEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYRIPDAYDDQEGGVDQEKRFAVAVQRYKDLDSREKMDPFAEQEAWEDHQIGKARLKFGSKNKKASDDYQFVFEDQINFIKESVMAGENYEDDMHPKEAQDAAEKTALEELQEVRKSLPIYGYREQLLQAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINFTSAPEADYMDAAIVTVLTIHVREPLGDILVFLTGQEEIETAEEILKQRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSAGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKALELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSVGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEISSNMNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQRKDVEDDASKKMPKGAGKAAI